write fasta

write_fasta(x, file = "", compress = FALSE, quiet = FALSE)

Arguments

x

a list of sequences in DNAbin or AAbin format, or a vector of sequences as concatenated upper-case character strings.

file

character string giving a valid file path to output the text to. If file = "" (default setting) the text file is written to the console.

compress

logical indicating whether the output file should be gzipped.

quiet

Whether progress should be printed to consoe