Convert NCBI gene ids to accession numbers

Convert NCBI gene ids to accession numbers

gid_to_acc(
  ids,
  database = "nuccore",
  chunk_size = 300,
  multithread = TRUE,
  progress = FALSE,
  quiet = FALSE
)

Arguments

ids

A character or numeric vector of NCBI gids

database

The origin database of the gids, default 'nuccore'

chunk_size

The size of the chunked searches to conduct. Warning, chunk sizes over 300 can be too big for the NCBI servers.

multithread

Whether multithreading should be used

progress

Whether a progress bar is displayed.

quiet

Whether progress should be printed to the console.